Publications (* = trainee, ^ = contributed equally)
2024
A Shankar, J Tanner*, T Mao, RF Betzel, R Prakash (2024). Edge Community Entropy is a Novel Neural Correlate of Aging and Moderator of Fluid Cognition. J. Neurosci.
RF Betzel, M Grazia Puxeddu, C Seguin, V Bazinet, A Luppi, A Podschun, P Singleton, J Faskowitz, V Parakkattu*, B Misic, S Markett, A Kuceyeski, L Parkes (2024). Controlling the human connectome with spatially diffuse input signals.
F Milislav, V Bazinet, RF Betzel, B Misic (2024). A simulated annealing algorithm for randomizing weighted networks. bioRxiv.
Y Liu, C Seguin, RF Betzel, D Akarca, M Di Biase, A Zalesky (2024). A generative model of the connectome with dynamic axon growth. bioRxiv.
MG Puxeddu, J Faskowitz, C Seguin, Y Yovel, Y Assaf, RF Betzel, O Sporns (2024). Network modularity and its relation to brain volume in the mammalian connectome. PLOS Biology.
E Ragone*, J Tanner*, Y Jo*, F Zamani Esfahlani, J Faskowitz, M Pope, L Coletta, A Gozzi, RF Betzel (2024). Modular subgraphs in large-scale connectomes underpin spontaneous co-fluctuation ``events'' in mouse and human brains. Communications Biology.
A Luppi, SP Singleton, J Hansen, D Bzodk, A Kuceyeski, RF Betzel, B Misic (2024). Transitions between cognitive topographies: contributions of network structure, neuromodulation, and disease. Nature Biomedical Engineering.
N Ni, X Zheng, RF Betzel, T James (2024). Increased Segregation in Functional Connectivity Networks When Watching Unpleasant Arousing Videos: A gPPI analysis. Brain Connectivity.
2023
J Tanner*, S Mansour, L Coletta, A Gozzi, RF Betzel (2023). Functional connectivity modules in recurrent neural networks: function, origin and dynamics. arXiv.
RF Betzel, M Grazia Puxeddu, C Seguin (2023). Hierarchical communities in the larval \emph{Drosophila} connectome: Links to cellular annotations and network topology. bioRxiv.
RF Betzel, J Faskowitz, O Sporns (2023). Living on the edge: network neuroscience beyond nodes. Trends in Cognitive Sciences.
S Cutts, E Chumin, RF Betzel, O Sporns (2023). Temporal Variability of Brain-Behavior Relationships in Fine-Scale Dynamics of Edge Time Series. bioRxiv.
R Kong, L Uddin, RF Betzel, JR Cohen, … , BTT Yeo, RN Spreng (2023). Consensus, convergence, and correspondence among functional brain network atlases. bioRxiv.
L Uddin, RF Betzel, JR Cohen, JS Damoiseaux, F De Brigard, SB Eickhoff, A Fornito, C Gratton, EM Gordon, AR Laird, L Larson-Prior, AR McIntosh, LD Nickerson, L Pessoa, AL Pinho, RA Poldrack, A Razi, S Sadaghiani, JM Shine, A Yendiki, BTT Yeo, RN Spreng (2023). Controversies and current progress on large-scale brain network nomenclature from OHBM WHATNET: Workgroup for HArmonized Taxonomy of NETworks. Network Neuroscience
RF Betzel, S Cutts, J Tanner*, S Greenwell* T Varley, J Faskowitz*, O Sporns (2023). Hierarchical organization of spontaneous co-fluctuations in densely-sampled individuals using fMRI. Network Neuroscience.
A Rajesh, RF Betzel, … A Kramer (2023). Evaluating modularity benefits of an acting intervention: A Discriminant-Analysis Framework. (Frontiers in Human Neuroscience).
MG Chappel-Farley, JN Adams, RF Betzel, SM Kim, JC Janecek … MA Yassa, BA Mander (2023). Medial temporal lobe functional network architecture supports sleep-related emotional memory processing in older adults.
H Merritt, J Faskowitz, M Gonzalez, RF Betzel (2023). Stability of brain-behavior correlation patterns across measures of social support. bioRxiv.
A Hannum, MA Lopez, SA Blanco, RF Betzel (2023). High-Accuracy Machine Learning Techniques for Functional Connectome Fingerprinting and Cognitive State Decoding. Human Brain Mapping.
Y Liu, C Seguin, S Mansour, S Oldham, RF Betzel, M Di Biase, A Zalesky (2023). Parameter estimation for connectome generative models: Accuracy, reliability, and a fast parameter fitting method. Neuroimage.
S Cutts, J Faskowitz, RF Betzel, O Sporns (2023). Uncovering Individual Differences in Fine-Scale Dynamics of Functional Connectivity. Cerebral Cortex.
JC Tanner*, J Faskowitz*, K Byrge, DP Kennedy, O Sporns, RF Betzel (2023). Synchronous high-amplitude co-fluctuations of functional brain networks during movie-watching. Imaging Neuroscience. [supplementary movie]
2022
J Faskowitz, MG Puxeddu, M van den Heuvel, B Misic, Y Yovel, Y Assaf, RF Betzel, O Sporns (2022). Connectome topology of mammalian brains and its relationship to taxonomy and phylogeny. Frontiers in Neuroscience
J Tanner, J Faskowitz, AS Teixeira, C Seguin, L Coletta, A Gozzi, B Misic ,RF Betzel (2022). Redefining the connectome: A multi-modal, asymmetric, weighted, and signed description of anatomical connectivity. bioRxiv
JK Hsieh, PR Prakash, R Flint, Z Fitzgerald, E Mugler, Y Wang, N Crone, J Templer, JM Rosenow, M Tate, RF Betzel, M Slutzky (submitted). Electrocorticographic (ECoG) functional network features identify critical language nodes, which act as connector nodes within functional brain networks.
RF Betzel, E Chumin, F Zamani Esfahlani*, J Tanner*, J Faskowitz* (2022). System-level high-amplitude co-fluctuation in human fMRI. bioRxiv.
AC Krendl, RF Betzel (2022). Social Network Neuroscience. Social, Cognitive, and Affective Neuroscience.
ZQ Liu, B Vazquez-Rodriguez, RN Spreng, BC Bernhardt, RF Betzel, B Misic (2022). Time-resolved structure-function coupling in brain networks. Communications Biology.
S Idesis, J Faskowitz, RF Betzel, M Corbetta, O Sporns, G Deco (2022). Edge-centric analysis of stroke patients: An alternative approach for biomarkers of lesion recovery. Neuroimage Clinical
A Weinberger, R Cortes, RF Betzel, AE Green (2022). Exploring Functional Brain Network Modularity in Educational Contexts. bioRxiv.
F Zamani Esfahlani*, J Faskowitz, J Slack*, B Misic, RF Betzel (2022). Local structure-function relationships in human brain networks across the human lifespan. Nature Communications.
M Grazia Puxeddu, J Faskowitz, O Sporns, L Astolfi, RF Betzel (2022). Multi-modal and multi-subject modular organization of human brain networks. Neuroimage.
J Chumin, J Faskowitz, F Zamani Esfahlani*, Y Jo*, H Merritt*, J Tanner*, S Cutts, M Pope, O Sporns, RF Betzel (2022). Cortico-Subcortical Interactions in Overlapping Communities of Edge Functional Connectivity. Neuroimage.
RF Betzel, S Cutts, S Greenwell*, J Faskowitz, O Sporns (2022).Individualized event structure drives individual differences in whole-brain functional connectivity. Neuroimage.
FV Farahani, W Karwowski, MD Esposito, RF Betzel, et al. (2022). Diurnal variations of resting-state fMRI data: A graph-based analysis. Neuroimage.
ZQ Liu, RF Betzel, B Misic (2022). Benchmarking functional connectivity by the structure and geometry of the human brain. Network Neuroscience.
2021
Y Jo*, F Zamani Esfahlani*, J Faskowitz, E Chumin, O Sporns, RF Betzel (2021). The diversity and multiplexity of edge communities within and between brain systems. Cell Reports.
S Greenwell, J Faskowitz, L Pritschet, T Santander, E Jacobs, RF Betzel (2021). High-amplitude network co-fluctuations linked to variation in hormone concentrations over menstrual cycle. bioRxiv.
F Zamani Esfahlani*, L Byrge, JC Tanner, O Sporns, DP Kennedy, RF Betzel (2021). Edge-centric analysis of time-varying functional brain networks with applications in autism spectrum disorder. bioRxiv.
RF Betzel, P Vertes (2021). Organizing principles of the C. elegans contactome. Cell Systems.
F Zamani Esfahlani*, Y Jo*, M Grazia Puxeddu, H Merritt*, J Tanner*, D Greenwell*, R Patel* J Faskowitz, RF Betzel (2021). Modularity maximization as a flexible and generic framework for brain network exploratory analysis. Neuroimage.
M Pope, M Fukushima, RF Betzel, O Sporns (2021). Modular origins of high-amplitude co-fluctuations in fine-scale functional connectivity dynamics. PNAS.
C Jiang, RF Betzel, Y He, XN Zuo (2021). Toward Reliable Network Neuroscience for Mapping Individual Differences. bioRxiv.
J Faskowitz, RF Betzel, O Sporns (2021). Edges in Brain Networks: Contributions to Models of Structure and Function, arXiv.
Y Jo*, J Faskowitz, F Zamani Esfahlani*, O Sporns, RF Betzel (2021). Subject identification using edge-centric functional connectivity. Neuroimage.
J Faskowitz, J Tanner*, B Misic, RF Betzel (2021). An edge-centric model for harmonizing multi-relational network datasets. bioRxiv.
HR Evensmoen, LM Rimol, AM Winkler, RF Betzel, TI Hansen, H Nili, AK Håberg (2021). Allocentric representation in the human amygdala and ventral visual stream. Cell Reports.
U Braun, A Harneit, G Pergola, T Menara, A Schaefer, RF Betzel, et al (2021). Brain state stability during working memory is explained by network control theory, modulated by dopamine D1/D2 receptor function, and diminished in schizophrenia. Nature Communications.
O Sporns, J Faskowitz, S Teixeira, RF Betzel (2021). Dynamic expression of functional systems disclosed by fine-scale analysis of edge time series. Network Neuroscience.
2020
RF Betzel (2020). Community detection in network neuroscience. arXiv.
X Zhang, U Braun, A Harneit, Z Zang, L Geiger, RF Betzel, et al (2020). Generative network models identify biological mechanisms of altered structural brain connectivity in schizophrenia. Neuroimage.
RF Betzel (2020). Network neuroscience and the connectomics revolution. (to appear in “Connectomic Deep Brain Stimulation”).
M Cieslak, … RF Betzel … TD Satterthwaite (2020). QSIPrep: An integrative platform for preprocessing and reconstructing diffusion MRI. bioRxiv.
J Faskowitz, F Zamani Esfahlani*, Y Jo*, O Sporns, RF Betzel (2020). Edge-centric functional network representations of human cerebral cortex reveal overlapping system-level architecture. Nature Neuroscience.
M Puxeddu, J Faskowitz, RF Betzel, et al (2020). The modular organization of brain cortical connectivity across the human lifespan. Neuroimage.
F Zamani Esfahlani*^, Y Jo*^, J Faskowitz, D Kennedy, O Sporns, RF Betzel (2020). High-amplitude co-fluctuations in cortical activity drive resting-state functional connectivity. PNAS.
F Zamani Esfahlani*, M Bertolero, DS Bassett, RF Betzel (2020). Space-independent community and hub structure of functional brain networks. Neuroimage.
Y Kenett^, RF Betzel^, RE Beaty (2020). Community structure of the creative brain at rest. Neuroimage.
LE Suárez, RF Betzel, B Mišić (2020). Linking structure and function in macroscale brain networks. Trends in Cognitive Sciences.
GL Baum, Z Cui, DR Roalf, R Ciric, RF Betzel, et al (2020). Development of structure-function coupling in human brain networks during youth. PNAS.
Z Cui, J Stiso, GL Baum, JZ Kim, DR Roalf, RF Betzel, et al. (2020). Optimization of Energy State Transition Trajectory Supports the Development of Executive Function During Youth. eLife.
RF Betzel, L Byrge, F Zamani Esfahlani*, DP Kennedy (2020). Temporal fluctuations in the brain's modular architecture during movie-watching. Neuroimage.
RF Betzel (2020).Organizing principles of whole-brain functional connectivity in zebrafish larvae. Network Neuroscience.
2019
C Hall, A Lord, RF Betzel, A Zalesky, G Radford-Smith, L Cocchi (2019). Co-existence of network architectures supporting the human gut microbiome. iScience.
RF Betzel, et al (2019). The community structure of functional brain networks exhibits scale-specific patterns of variability across individuals and time. Neuroimage.
A Goulas, RF Betzel, & CC Hilgetag (2019). Spatiotemporal ontogeny of brain wiring. Science Advances, 355016.
RF Betzel, et al (2019). Distance-dependent consistency thresholds for generating group-representative structural brain networks. Network Neuroscience.
RF Betzel, et al (2019). Inter-regional ECoG correlations predicted by communication dynamics, geometry, and correlated gene expression. Nature Biomedical Engineering.
2018
DJ Lurie, D Kessler, DS Bassett, RF Betzel, et al. (2018). On the nature of resting fMRI and time-varying functional connectivity. PsyArXiv.
EJ Cornblath, A Ashourvan, JZ Kim, RF Betzel, et al. (2018). Context-dependent architecture of brain state dynamics is explained by white matter connectivity and theories of network control. bioRxiv.
P Reddy, RF Betzel, et al. (2018). Genetic and Neuroanatomical Support for Functional Brain Network Dynamics in Epilepsy. arXiv.
CH Xia, Z Ma, R Ciric, S Gu, RF Betzel, et al. (2018). Linked dimensions of psychopathology and connectivity in functional brain networks. Nature Communications, 9(1), 3003.
RF Betzel & DS Bassett (2018). Specificity and robustness of long-distance connections in weighted, interareal connectomes. PNAS, 201720186.
B Misic, RF Betzel, et al (2018). Network-based asymmetry of the human auditory system. Cerebral Cortex, 28(7), 2655-2664.
M Fukushima, RF Betzel et al (2018). Structure–function relationships during segregated and integrated network states of human brain functional connectivity. Brain Structure and Function, 223(3), 1091-1106.
AE Sizemore, C Giusti, A Kahn, JM Vettel, RF Betzel, & DS Bassett (2018). Cliques and cavities in the human connectome. Journal of Computational Neuroscience, 44(1), 115-145.
RF Betzel et al (2018). Diversity of meso-scale architecture in human and non-human connectomes. Nature Communications, 9(1), 346.
YN Kenett, JD Medaglia, RE Beaty, Q Chen, RF Betzel et al (2018). Driving the brain towards creativity and intelligence: A network control theory analysis. Neuropsychologia.
U Braun, A Schaefer, RF Betzel, et al (2018). From maps to multi-dimensional network mechanisms of mental disorders. Neuron, 97(1), 14-31.
RF Betzel, et al (2018). Non-assortative community structure in resting and task-evoked functional brain networks. bioRxiv, 251827.
2017
JC Worrell, J Rumschlag, RF Betzel, et al (2017). Optimized connectome architecture for sensory-motor integration. Network Neuroscience, 1(4), 415-430.
RF Betzel & DS Bassett (2017). Generative models for network neuroscience: Prospects and promise. Journal of the Royal Society Interface, 14(136), 20170623.
RF Betzel & DS Bassett (2017). Multi-scale brain networks. Neuroimage, 160, 73-83.
M Fukushima, RF Betzel, et al (2017). Fluctuations between high-and low-modularity topology in time-resolved functional connectivity. Neuroimage.
AN Khambhati, AE Sizemore, RF Betzel, DS Bassett (2017). Modeling and interpreting mesoscale network dynamics. Neuroimage.
GL Baum, R Ciric, DR Roalf, RF Betzel, et al (2017). Modular segregation of structural brain networks supports the development of executive function in youth. Current Biology, 27(11), 1561-1572.
RF Betzel et al (2017). Positive affect, surprise, and fatigue are correlates of network flexibility. Scientific Reports, 7(1), 520.
S Gu, RF Betzel et al (2017). Optimal trajectories of brain state transitions. Neuroimage, 148, 305-317.
RF Betzel et al (2017). The modular organization of human anatomical brain networks: Accounting for the cost of wiring. Network Neuroscience, 1(1), 42-68.
E Wu-Yan, RF Betzel, et al. (2017). Benchmarking measures of network controllability on canonical graph models. Journal of Nonlinear Science, 1-39.
XN Zuo, Y He, RF Betzel, et al. (2017). Human connectomics across the lifespan. Trends in Cognitive Sciences, 21(1), 32-45.
2016
H Mohr, U Wolfensteller, RF Betzel, et al (2016). Integration and segregation of large-scale brain networks during short-term task automatization. Nature Communications, 7, 13217.
RF Betzel et al. (2016). Optimally controlling the human connectome: the role of network topology. Scientific Reports, 6, 30770.
MG Mattar, RF Betzel, DS Bassett (2016). The flexible brain. Brain, 139(8), 2110-2112.
B Misic, RF Betzel, et al. (2016). Network-level structure-function relationships in human neocortex. Cerebral Cortex, 26(7), 3285-3296.
RF Betzel et al (2016). Dynamic fluctuations coincide with periods of high and low modularity in rest-state functional brain networks. Neuroimage, 127, 287-297.
O Sporns & RF Betzel (2016). Modular brain networks. Annual Review of Psychology, 67, 613-640.
RF Betzel, et al. (2016). Generative models of the human connectome. Neuroimage, 124, 1054-1064.
2015
RF Betzel, et al. (2015). Functional brain modules reconfigure at multiple scales across the human lifespan. arXiv.
B Misic^, RF Betzel^, et al. (2015). Cooperative and competitive spreading dynamics on the human connectome. Neuron, 86(6), 1518-1529.
2014
B Misic, J Goni, RF Betzel, et al. (2014). A network convergence zone in the hippocampus. PLoS Computational Biology, 10(12), e10033982.
RF Betzel, et al (2014). Changes in structural and functional connectivity among resting-state networks across the human lifespan. Neuroimage, 102, 345.
A Avena-Koenigsberger, J Goni, RF Betzel (2014). Using Pareto optimality to explore the topology and dynamics of the human connectome. Philosophical Transactions of the Royal Society, B, 369(1653), 20130530.
J Goni, MP van den Heuvel, A Avena-Koenigsberger, NV de Medizabal, RF Betzel, et al. (2014). Resting-brain functional connectivity predicted by analytic measures of network communication. PNAS, 111(2), 833-838.
2013
RF Betzel, et al. (2013). Multi-scale community organization of the human structural connectome and its relationship with resting-state functional connectivity. Network Science, 1(3), 353-373.
J Goni et al. (2013). Exploring the Morphospace of Communication Efficiency in Complex Networks, PLoS ONE, 8(3), e58070.
2012
RF Betzel et al (2012). Synchronization Dynamics and Evidence for a Repertoire of Network States in Resting EEG. Frontiers in Computational Neuroscience, 6, 74.